>E.coli GAAGCU-GAC--CAGACAGUC---GCC---GCUU-C--GU---CGUCGUCCUC--------UUCG--------GGGG-AGAC-G---GGC-GG-A-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AGGG-UGCC-AGG----------------UAACG------------------CCU--GGGGG-G------------------------------------GAAA--------------------------------------CCCAC-GAC------------------------------------------------------------------CAGUGCA--ACAGAGAGCAA-ACCGCC----------------------------------GAUG--------------------------G-----CC---------------------------------------------CG------C-------------------------------------------------------------------------------------------------------------------------GCAA------------------------------------------------------------------------------------------------GC----G---G-G--AU-C-A---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CGC---GGC-UGGU----------------------------AACAGUCC--GUG---GC-------------------------------------ACGG-UAA-ACUCCACCC---G-GAGCAAGGCCAAAU-----------------------------------------AGGGGUU-C--AU----------------------------------------------------------------------AA--GG-UACG--------------------------------------GC-CC---------GU-A-CU---------------------------------------G-AACCC------------------------------------------------------GGGU--AG-GCUGCU------------------------------------UGA-GCC-AG-UG-A--------GCGA-------------U-UG-C-UG--G-CCU-AGAUGAAUGACUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GUCA----GUUUCACCU >A.tumefaciens CCAGUU-GGC--CGGGCAGCC---GCG---CCUU-A--CCAAUGUC---------------GAAA---------------GA-C----GG-UA-A-GGUGAGGAAAGUCCGGGCUC-C--------------A-CGGAAAU-ACGG-UGCC-GGA----------------UAACG------------------UCC--GGCGG-GG-----------------------------------GCGA-------------------------------------CCCCAG-GGA------------------------------------------------------------------AAGUGCC--ACAGAGAGCAA-ACCGCC------------------------------------AU--------------------------G-----C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUU-------------------------------------------------------------------------------------------------------------G---C-A-U---GGUAAG---G-GUGAAAG-GGUG-----------------------------------GGGUAAGAGCC-CACC-G---CGC---CGC-UGGU----------------------------GACAG-UG--GUG---GC-------------------------------------AAGG-UAA-ACCCCACCG---G-GAGCAAGACCGAAU-----------------------------------------AGGGAUG-AC-ACG------GGGCG--GGC--------------GAAA---------------G-CC------UGUUC----ACA-----GCCG--------------------------------------GU-UUCCG------GG-C--------------------------------------CC-GU-CAUCC------------------------------------------------------GGGU--GG-GUUGCG------------------------------------AGA-GGC-GG-CA-U--------GCAA-------------A-UG-C-CG--U-CCC-AGAUGAAUGGCUGCC-------ACGU-U---CC--G---G-------------------------------------GUCAAA----------------------------------------------C-C-G------GG-G--CC-A-U--ACAGAACCCGGCUUAC-AG-GCCA----ACUGGCGAA >R.capsulatus GCGGAA-GAC--CGGAUGACC---GCG---GCGG-C--CC---AUAG-CUCCG--------UUUUU-------CGGA-UAGC-U----GG-GC-C-UCCGAGGAAAGUCCGGACUC-C--------------A-UGAAGCA-ACGG-UGCC-GGG----------------UAACG------------------CCC--GGCGG-GG-----------------------------------GCAA-------------------------------------CCCCAG-GGA------------------------------------------------------------------AAGCGCC--ACAGAGAACAG-ACCGCC------------------------------------CC--------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUUG----------------------------------------------------------------------------------------------------------------C-G-G---GGUGAG---G-GUGAAAC-GGUG-----------------------------------GGGUAAGAGCC-CACC-G---CGG---GAC-UGGC----------------------------AACAG-GA--CCG---GC-------------------------------------ACGG-CAA-GCCCCACCG---G-GAGCAACGCCGAAU-----------------------------------------AGGGAUG-CC-GC-------GCCGC--AACCG------------GAAA-------------CGG-GG-----GACGGC------A---G-GGGA--------------------------------------GC-UUCG-------CC-C-C------------------------------------GA-GG-UGUCC------------------------------------------------------GGGU--UG-GCGGCU------------------------------------UGA-GGC-UG-CG-G--------GUGA-------------C-CG-C-AG--A-CCC-AGAGGAAUGGUCAUC-------CAGG-G---G----------------------------------------------GCAA----------------------------------------------------------CC-C--C--G-G--ACAAAAUCCGGCUUAC-AG-GUCU----UCCGCGCGC >R.rubrum CCAGUC-GGC--CGGAUGGCC---GCU---CUCC-GUCAU---CGUC-CCCGGG-------CCACC------CCCGAUGGAC-C----GU-CG-G-GGGGAGGAAAGUCCGGGCUC-C--------------A-CGGGAAC-ACGG-UGCC-GGG----------------UAACG------------------CCC--GGCGG-GG-----------------------------------GCGA-------------------------------------CCCUAG-GGA------------------------------------------------------------------AAGUGCC--ACAGAGAGCAA-ACCGCC------------------------------------GG--------------------------C-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAUAC------------------------------------------------------------------------------------------------------------G---G-C-C---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CCU---GCC-CGGC----------------------------AACGG-GG--AGG---GC-------------------------------------AUGG-UAA-ACCCCACCG---G-GAGCAAGAUCGAAU-----------------------------------------AGGGACG-GC-AC-------GCCCC--GG---------------UUUU-----------------CC------GGGGC-----AA---G-CGGC--------------------------------------GU-UU---------CC-G-C-----------------------------------GCC-GC-CGUCC------------------------------------------------------GGGU--AGUAUCGCG------------------------------------CGA-GGC-GU-CC-G--------GUAA-------------C-GG-G-CG--U-CCC-AGAUGAAUGGCCAUC-------CCCG-U---CG--U---C-GCGU--CCC----------------------------UUGC--------------------------GG--G--AU-----A-----CG-GCC------GG-C--GU-G-G--ACAGAACCCGGCUUAC-AG-GCCG----UCUGGCGGU >R.prowazekii CUAAAU-GGU--CGUGCAGUU---GCG---UGAU---------------------------GAUA---------------------------A-U-CACGAGGAAAGUCCGGACUC-U--------------A-UAGAGGU-AUGG-UGCC-GGU----------------UAACA------------------UCC--GGCAG-AG---UA------------------------------UUAU---------------------------------U-A-CUUUAG-GGC------------------------------------------------------------------UAGUACC--ACAGAAAAUAU-ACCGCC------------------------------------GA--------------------------G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UAU-----------------------------------------------------------------------------------------------------------------U-U-C---GGUAAG---G-GUGAAAA-GGUG-----------------------------------UGGUAAGAGCA-CACC-G---GUA---AGU-UGGC----------------------------AACAA-GU--UAC---GC-------------------------------------AUGG-UUA-ACCCCACCA---A-GAGCAAGAUCAAAU-----------------------------------------AGGCAUU-ACA---------GAAUU--UAAAU------------AUUU-------------AUU-UA------AGUUC---------CU-GGGU--------------------------------------UA-CCUCUA-----AU-C-GG-----------------------------------AUUGU-AAUGC------------------------------------------------------GGGU--AG-AUCGCU------------------------------------UGA-GGU-AA-AC-G--------GUAA-------------C-GU-U-UA--U-CCU-AGAUAAAUAACUGCA-------AUGA-A---U----------------------------------------------UAAU----------------------------------------------------------AU-U--C--A-U--ACAGAAUCCGGCUUAU-AG-ACCA----GAUGAGCAG >A.eutrophus AAAGCA-GGC--CAGGCAACC---GCU---GCCU-G--CA---CC----------------GCAA----------------G-G----UG-CA-G-GGGGAGGAAAGUCCGGACUC-C------------ACA----GGGC-AGGG-UGUU-GGC----------------UAACA------------------GCC--AUCCA-CG-----------------------------------GCAA-------------------------------------CGUGCG-GAA------------------------------------------------------------------UAGGGCC--ACAGAGACGA--GUCUUG------------------------------------CC--------------------------G-----CC---------------------------------------------GG------G-------------------------------------------------------------------------------------------------------------------------UUCG------------------------------------------------------------------------------------------------CC----C---G-G---C-G-G---GAA--G---G-GUGAAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------GCGG-UAA-CCUCCACCU---G-GAGCAAUCCCAAAU-----------------------------------------AGGCAGG-C--GA-----------------------------------------------------------------------U--GA-AGCG--------------------------------------GC-CC---------GC-U-GA---------------------------------------G-UCUGC------------------------------------------------------GGGU--AG-GGAGCU------------------------------------GGA-GCC-GG-CU-G--------GUAA-------------C-AG-C-CG--G-CCU-AGAGGAAUGGUUGUC-------ACGC-A---CC--G---U-UUGC--C------------------------------GCAA------------------------------G--GC-----G-----GG-C-G------GG-G--C--G-C--ACAGAAUCCGGCUUAU-CG-GCCU----GCUUUGCUU >N.gonnorhoeae CGGGAC-GGG--CAGACAGUC---GCC---GCGU-A--UC---GC----------------GUAA----------------G-G----CA-UA-C-GGGGAGGAAAGUCCGGGCUC-C------------GCA----GGGU-AGAA-UGCC-GGU----------------UAACG------------------GCC--GGGCG-CG-----------------------------------GUAA-------------------------------------CGCGAC-GGA------------------------------------------------------------------AAGUGGA--ACAGAAAGCAAAACCGCC----------------------------------GAUG--------------------------G-----CU---------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------UUUG-------------------------------------------------------------------------------------------------G----C---A-G---CAC-A---GGCAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGGGCG-CACC-G---CGC---AUU-UGGU----------------------------AACAAUAU--GCG---GC-------------------------------------AGGC-CAA-ACCCCAUUC---G-GAGCAAGACCAAA------------------------------------------CAGAACG-C--AA-----------------------------------------------------------------------U--GA-CGCU--------------------------------------GC-CC---------GC-C-GA---------------------------------------G-CGUUC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------UGA-GCA-UA-CC-G--------GCAA-------------C-GG-U-AU--G-CCU-AGAGGAAUGACUGUCCG---------------------------------------------------------------------------------------------------------------------------------------AGACAGAACCCGGCUUAC-CG-CCUG----UCCGGUGUG >N.meningitidis-Z2491 CGGGAC-GGG--CAGACAGUC---GCC---GCGU-A--UC---GC----------------GUAA----------------G-G----CA-UA-C-GGGGAGGAAAGUCCGGGCUC-C------------GCA----GGGU-AGAA-UGCC-GGU----------------UAACG------------------GCC--GGGCG-CG-----------------------------------GUAA-------------------------------------CGCGAC-GGA------------------------------------------------------------------AAGUGGA--ACAGAAAGCAAAACCGCC----------------------------------GAUG--------------------------G-----CU---------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------UUUG-------------------------------------------------------------------------------------------------G----C---A-G---CAC-A---GGCAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGGGCG-CACC-G---CGC---AUU-UGGU----------------------------AACAAUAU--GCG---GC-------------------------------------AGGC-CAA-ACCCCAUUC---G-GAGCAAGACCAAA------------------------------------------CAGAACG-C--AA-----------------------------------------------------------------------U--GA-CGCU--------------------------------------GC-CC---------GC-C-GA---------------------------------------G-CGUUC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------UGA-GCA-UA-CC-G--------GCAA-------------C-GG-U-AU--G-CCU-AGAGGAAUGACUGUCCG---------------------------------------------------------------------------------------------------------------------------------------AGACAGAACCCGGCUUAC-CG-CCUG----UCCGGUGUG >N.meningtidis-MC58 CGGGAC-GGG--CAGACAGUC---GCC---GCGU-A--UC---GC----------------GUAA----------------G-G----CA-UA-C-GGGGAGGAAAGUCCGGGCUC-C------------GCA----GGGU-AGAA-UGCC-GGU----------------UAACG------------------GCC--GGGCG-CG-----------------------------------GUAA-------------------------------------CGCGAC-GGA------------------------------------------------------------------AAGUGGA--ACAGAAAGCAAAACCGCC----------------------------------GAUG--------------------------G-----CU---------------------------------------------GC--------------------------------------------------------------------------------------------------------------------------------UUUG-------------------------------------------------------------------------------------------------G----C---A-G---CAC-A---GGUAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGGGCG-CACC-G---CGC---AUU-UGGU----------------------------AACAAUAU--GCG---GC-------------------------------------AGGC-CAA-ACCCCAUUC---G-GAGCAAGACCAAA------------------------------------------CAGAACG-C--AA-----------------------------------------------------------------------U--GA-CGCU--------------------------------------GC-CC---------GC-C-GA---------------------------------------G-CGUUC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------UGA-GCA-UA-CC-G--------GUAA-------------C-GG-U-AU--G-CCU-AGAGGAAUGACUGUCCG---------------------------------------------------------------------------------------------------------------------------------------AGACAGAACCCGGCUUAC-CG-CCUG----UCCGGUGUG >A.ferrooxidans GGAGUG-GGC--CAGGCGACC---GCC---GCGG-A-------------------------GCAA--------------------------UC-C-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AAGG-CGCC-GGU----------------UAACG------------------GCC--GGGGG-GC-----------------------------------GUGA-------------------------------------GCCUAC-GGA------------------------------------------------------------------AAGUGCC--ACAGAAAAUAU-ACCGCC----------------------------------AAGC--------------------------G-----C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUAA------------------------------------------------------------------------------------------------------------G---C-G-C---GGUAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CAU---UUC-CGGU----------------------------AACGG-AA--AUG---GC-------------------------------------AGGG-AAA-ACCCCGCCU---G-GAGCAAGACCAAAU-----------------------------------------AGGCGUG-C--GA-----------------------------------------------------------------------U--AC-CGUG--------------------------------------GC-CC---------GC-G-GU---------------------------------------G-CACGC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------GGA-GCC-UG-UG-C--------GUAA-------------G-UG-C-AG--G-CCU-AGAGGAAUGGUCGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GCCC----ACUCCAAUU >A.ferrooxidans-g GGAGUG-GGC--CAGACGACC---GCC---GCGG-A-------------------------GCAA--------------------------UC-C-GGGGAGGAAAGUCCGGGCUC-C------------ACA----GGGC-AAGG-CGCC-GGC----------------UAACG------------------GCC--GGGAG-GC-----------------------------------GUGA-------------------------------------GCCUAC-GGA------------------------------------------------------------------AAGUGCC--ACAGAAAAUAU-ACCGCC---------------------------------AAAGC--------------------------G-----C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUAA------------------------------------------------------------------------------------------------------------G---C-GCC---GGUAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CAU---UUC-CGGC----------------------------GACGG-GA--AUG---GC-------------------------------------AGGG-AAA-ACCCCGCCU---G-GAGCAAGACCAAAU-----------------------------------------AGGCGUG-C--GA-----------------------------------------------------------------------U--AC-CGUG--------------------------------------GC-CC---------GC-G-GU---------------------------------------G-CAUGC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------GGA-GCC-UG-CG-C--------GUAA-------------G-UU-C-AG--G-CCU-AGAGGAAUGGUCGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GCCC----ACUCCAAUU >C.vinosum GGAGUC-GGC--CAGACAGUC---GCU---UCCG-U--C----------------------CUGGU-----------------------G-AC-G-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AGGG-UGCC-AGG----------------UAACG------------------CCU--GGGGG-GC-----------------------------------GAGA-------------------------------------GUCCAC-GGA------------------------------------------------------------------AAGUGCC--GCAGAAAAGAU-ACCGCC---------------------------------GACCC--------------------------C-----GU---------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------CUCG------------------------------------------------------------------------------------------------------G---A-C---G-G-G--AGGUAAG---G-GUGAAAU-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CGC---UGG-UGGC----------------------------AACAU-CA--GUG---GC-------------------------------------AGGG-UAA-ACCCCACCC---G-GAGCAAGACCAAAU-----------------------------------------AGGGGAA-C--UC-------GCGGC-------------------UUCG-------------------------ACCGC------A-GCG-CGCG--------------------------------------GC-CC---------GC-G-CGU--------------------------------------G-UUCCC------------------------------------------------------GGGU--AG-GUCGCU------------------------------------AGA-GGC-GU-GC-G--------GCGA-------------C-GC-A-CG--U-CCC-AGAUGAAUGACUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GCCG----ACUCCCUUC >E.agglomerulans GAAGCU-GAC--CAGACAGUC---GCC---GCUU-C--GU---CGUCGUCCUCC-------UUCG-------GGGGG-AGAC-G---GGC-GG-A-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AAGG-UGCC-AGG----------------UAACG------------------CCU--GGGGG-GU---G-------------------------------UCAC-----------------------------------G-ACCCAC-GAC------------------------------------------------------------------CAGUGCA--ACAGAGAGCAA-ACCGCC----------------------------------GAUG--------------------------G-----CC---------------------------------------------CG------C-------------------------------------------------------------------------------------------------------------------------GCAA------------------------------------------------------------------------------------------------GC----G---G-G--AU-C-A---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CGC---GGC-UGGU----------------------------AACAGUCC--GCG---GC-------------------------------------ACGG-UAA-ACUCCACCC---G-GAGCAAGGCCAAAU-----------------------------------------AGGGGUU-C--AU----------------------------------------------------------------------AA--GG-UACG--------------------------------------GC-CC---------GU-A-CU---------------------------------------G-AACCC------------------------------------------------------GGGU--AG-GCUGCU------------------------------------UGA-GCC-AG-UG-A--------GCGA-------------U-UG-C-UG--G-CCU-AGAUGAAUGACUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GUCA----GUUUCACCU >H.influenza CGAGUU-GGU--UAGACAAUC---GCU---GGUU-U--AU---UGAAGCCCUUAACCGUA-UUUA--UACGACCUAGUGGGACA---AGU-AA-A-CGAGAGGAAAGUCCGAGCUA-C------------ACA----GGGC-AGAG-UGCC-GGA----------------UAACG------------------UCC--GGGCG-GC-----------------------------------GUGA-------------------------------------GCCGAC-GAC------------------------------------------------------------------CAGUGCA--ACAGAGAGCAG-ACCGCC------------------------------------GU-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUAA------------------------------------------------------------------------------------------------------------------A-C---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---UGC---CGU-UGGU----------------------------AACAACGU--GCA---GC-------------------------------------AGGG-UAA-ACUCCACUC---G-UAGCAAGACCAAAU-----------------------------------------AGGAACU-C--A------------------------------------------------------------------------A--UG-GGUG--------------------------------------GC-CC---------GU-C-CA---------------------------------------G-AGUUC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------UGA-GCG-GC-AG-A--------GUAA-------------U-UU-G-UC--G-CCU-AGAGGAAUGAUUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACUCGGCUUAU-CG-ACCA----ACUCAAAAC >K.pneumoniae GAAGCU-GAC--CAGACAGUC---GCC---GCUU-C--GU---CGUCGUCCUCC-------UUCG-------GGGGG-AGAC-G---GGC-GG-A-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AAGG-UGCC-AGG----------------UAACG------------------CCU--GGGGG-GU---G-------------------------------UCAC-----------------------------------G-ACCCAC-GAC------------------------------------------------------------------CAGUGCA--ACAGAGAGCAA-ACCGCC----------------------------------GAUG--------------------------G-----CC---------------------------------------------CG------C-------------------------------------------------------------------------------------------------------------------------GCAA------------------------------------------------------------------------------------------------GC----G---G-G--AU-C-A---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CGC---GGC-UGGU----------------------------AACAGUCC--GCG---GC-------------------------------------ACGG-UAA-ACUCCACCC---G-GAGCAAGGCCAAAU-----------------------------------------AGGGGUU-C--AU----------------------------------------------------------------------AA--GG-UACG--------------------------------------GC-CC---------GU-A-CU---------------------------------------G-AACCC------------------------------------------------------GGGU--AG-GCUGCU------------------------------------UGA-GCC-AG-UG-A--------GCGA-------------U-UG-C-UG--G-CCU-AGAUGAAUGACUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GUCA----GUUUCACCU >P.fluorescens AGAGUC-GAU--UGGACAGUC---GCU---GCCC-U--CU---AU----------------GAAA----------------A-U---UAG-GG-G-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-GAAG-UGCC-AGG----------------UAAUG------------------CCU--GGGGG-GC-----------------------------------GUGA-------------------------------------GCCUAC-GGA------------------------------------------------------------------AAGUGCC--ACAGAAAAUA--ACCGCC---------------------------------UAAGC--------------------------A-----C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUCG------------------------------------------------------------------------------------------------------------G---U-G-CC--GGUAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CAC---GAC-UGGC----------------------------AACAGUUC--GUG---GC-------------------------------------UAGG-UAA-ACCCCACUU---G-GAGCAAGACCAAAU-----------------------------------------AGGGUUC-C--A------------------------------------------------------------------------A--GG-CGUG--------------------------------------GC-CC---------GC-G-CU---------------------------------------G-GAACC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------AAA-GAU-GU-CC-A--------GUGA-------------U-GG-C-CA--U-CGU-AGACGAAUGACUGUUCA---------------------------------------------------------------------------------------------------------------------------------------AGACAGAACCCGGCUUAU-AG-AUCG----ACUCUCCAC >P.aeruginosa AGAGUC-GAU--UGGACAGUC---GCU---GUCG-C--GC---------------------AAUA-----------------------GC-GC-G-GUGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AGAG-UGCC-AGG----------------UAACG------------------CCU--GGGAG-GC-----------------------------------GCGA-------------------------------------GCCUAC-GGA------------------------------------------------------------------AAGUGCC--ACAGAAAAUA--ACCGCC---------------------------------UAAGC--------------------------G-----C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACA------------------------------------------------------------------------------------------------------------G---C-G-CC--GGUAAG---G-GUGAAAA-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CAC---GGC-UGGC----------------------------AACAGUGC--GUG---GC-------------------------------------UAGG-UAA-ACCCCACUC---G-GAGCAAGACCAAAU-----------------------------------------AGGAAUC-C--AU-----------------------------------------------------------------------U--GG-CGCG--------------------------------------GC-CC---------GC-G-UU---------------------------------------G-GAUUC------------------------------------------------------GGGU--AG-GUCGCU------------------------------------UGA-GGC-GU-AC-A--------GUGA-------------U-GU-G-CG--U-CCC-AGAGGAAUGGCUGUCCU---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-AG-AUCG----ACUCUCCCA >S.typhimurium GAAGCU-GAC--CAGACAGUC---GCC---GCUU-C--GU---CGUCGUCCU---------UUCG---------GGG-AGAC-G---GGC-GG-A-GGGGAGGAAAGUCCGGGCUC-C------------AUA----GGGC-AGGG-UGCC-AGG----------------UAACG------------------CCU--GGGGG-G------------------------------------GAAA--------------------------------------CCCAC-GAC------------------------------------------------------------------CAGUGCA--ACAGAGAGCAA-ACCGCC----------------------------------GAUG--------------------------G-----CC---------------------------------------------CA------C-------------------------------------------------------------------------------------------------------------------------GUAA------------------------------------------------------------------------------------------------GU----G---G-G--AU-C-A---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---CGC---GGC-UGGU----------------------------AACAGUCC--GUG---GC-------------------------------------ACGG-UAA-ACUCCACCC---G-GAGCAAGGCCAAAU-----------------------------------------AGGGGUU-C--AU----------------------------------------------------------------------AA--GG-UACG--------------------------------------GC-CC---------GU-A-CU---------------------------------------G-AACCC------------------------------------------------------GGGU--AG-GCUGCU------------------------------------UGA-GCC-AG-UG-A--------GCGA-------------U-UG-C-UG--G-CCU-AGAUGAAUGACUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAACCCGGCUUAU-CG-GUCA----GUUUCACCU >S.putrefaciens CGAGUU-GGC--CAGACAGUC---GCC---GCGU-U--C----------------------GCAA------------------------G-AA-C-GGGGAGGAAAGUCCGGGCUU-C------------AAA----GAGC-AGGG-UGCC-AGG----------------UAACG------------------CCU--GGGCG-GU-----------------------------------GUGA-------------------------------------ACCGAC-GAC------------------------------------------------------------------AAGUGCA--ACAGAGAGGAG-ACCGCC------------------------------------AU--------------------------C-----AU---------------------------------------------AG------C-------------------------------------------------------------------------------------------------------------------------CUCG------------------------------------------------------------------------------------------------GC----U---A-A---G-G-U---GGUAAG---G-GUGAAAG-GGUG-----------------------------------CGGUAAGAGCG-CACC-G---UGC---GGC-UAGC----------------------------AAUAGUCC--GUA---GC-------------------------------------AAGG-UAA-ACUCCACCC---G-AAGCAAGACCAAAU-----------------------------------------AGGGUUC-C--GU----------------------------------------------------------------------AU--GG-CGUG--------------------------------------GC-UC---------GC-G-UU---------------------------------------G-GAACC------------------------------------------------------GGGU--AG-GUCGCU------------------------------------UGA-GCC-UG-UG-A--------GCGA-------------U-UG-C-AG--G-CCU-AGAUGAAUGACUGUCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGGACCCGGCUUAU-CG-GCCA----ACUCAACCU >D.desulfuricans GGAGUC-GGA--CGGAUCGUC---GCC---GCGG-G--G----------------------GCAA------------------------C-UC-C-GGGGAGGAAAGUCCGGGCUC-C------------AAA----GGGC-AGAA-CGCU-GGA----------------UAACA------------------UCC--AGGGA-GG-----------------------------------GCAA-------------------------------------CCUC-C-GGA------------------------------------------------------------------CAGCGCC--ACAGAAAGCAA-ACCGCC------------------------------------CG--------------------------G-----C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CUCG------------------------------------------------------------------------------------------------------------G---C-C-G---GGUAAG---G-GUGAAAC-GGUG-----------------------------------GUGUAAGAGAC-CACCAG---AUG---CCG-UGGU----------------------------GACAC-GG--CAU---GCU-------------------------------------CGG-CAU-ACCCCGUUC---G-GAGCAAGACCAAAU-----------------------------------------AGGGAAG-G------------------------------------------------------------------------------CG-GCCG--------------------------------------GC-CC---------GG-C-CG----------------------------------AAG--C-CUUCC------------------------------------------------------GGGU--AG-GUUGCU------------------------------------UGA-GGG-UG-UG-G--------GCAA-------------C-CG-C-AC--U-CCU-AGAGGAAUGACGGUC-------ACAC-G---CG--G------------------------------------------GCAA-------------------------------------------------C-C------GU-G--U--G-G--ACAGAACCCGGCUUAC-AG-UCCG----ACUCCCGCA >S.bikiniensis CGAGCC-GGG--CGGGCGGCC---GCG---UGGG-G--GU---C-----------------UUCG------------------G----AC-CU-C-CCCGAGGAACGUCCGGGCUC-C------------ACA----GAGC-AGGG-UGGU-GGC----------------UAACG------------------GCC--ACCCG-GG-----------------------------------GUGA-------------------------------------CCCGCG-GGA------------------------------------------------------------------CAGUGCC--ACAGAAAACAG-ACCGCC------------------------------------GG--------------------------G-----GA---------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------CUCG------------------------------------------------------------------------------------------------------G---U-C---C-U-C---GGUAAG---G-GUGAAAC-GGUG-----------------------------------GUGUAAGAGAC-CACCAG---CGC---CUG-AGGC----------------------------GACUC-AG--GCG---GCU-------------------------------------AGG-UAA-ACCCCACUC---G-GAGCAAGGUCAAGA-GGGG--ACAC------CCCG-------GUGUCCCU-----GCGCGGA-U--GU----------------------------------------------------------------------UC-GAG-GGCU--------------------------------------GC-UC---------GC-C-CGA--------------------------------------G-UCCGC------------------------------------------------------GGGU--AG-ACCGCA------------------------------------CGA-GGC-CG-GC-G--------GCAA-------------C-GC-C-GG--C-CCU-AGAUGGAUGGCCGUCG------CCCC-GA--CG--A---C-C------------------------------------GCGA----------------------------------------------GG-U-C------CC-G--G--G-G--ACAGAACCCGGCGUAC-AG-CCCG----ACUCGUCUG >S.lividans CGAGCC-GGG--CGGGCGGCC---GCG---UGGA-G--UC---CC----------------UCAC----------------G-G----GA-CU-U-CCCGAGGAACGUCCGGGCUC-C------------ACA----GGGC-AGGG-UGAU-GGC----------------UAaCG------------------gCC--ACCCG-GG-----------------------------------GUGA-------------------------------------CCCGCG-GGA------------------------------------------------------------------CAGUGCC--ACAGAAAGCAG-ACCGCC------------------------------------GG--------------------------A-----GG---------------------------------------------C---------------------------------------------------------------------------------------------------------------------------------UUCG------------------------------------------------------------------------------------------------------G---C-C---C-C-C---GGUAAG---G-GUGAAAC-GGUG-----------------------------------GUGUAAGAGAC-CACCAG---UGC---CCA-GGGC----------------------------GACCU-GG--GCA---GCU-------------------------------------AGG-UAA-ACCCCACCC---G-GAGCAAGGUCAAGA-AGGA--AGCG-----CCCCGG------UGCUUCCU-----GCGCGGA-C--GU----------------------------------------------------------------------UC-GAG-GGCU--------------------------------------GC-CC---------GC-C-CGA--------------------------------------G-UCCGC------------------------------------------------------GGGU--AG-ACCGCU------------------------------------GGA-GGC-CG-GU-G--------GCAA-------------C-GC-C-GG--U-CCU-AGAUGGAUGGCCGUC-------GCCG-A---CG--G---GACCC----------------------------------GCGA----------------------------------G-----G-----CC-C-C------GU-C--G--G-A--ACAGAACCCGGCGUAC-AG-CCCG----ACUCGUCUG >B.thetaiotaomicron GCAGUU-GGC--CGGUCUGUC---GCG---UGCG-C--G-----------------------UUU-----------------------C--GU-G-CAGGAGGAAAGUCCGGGCAA-C------------ACA----GAGC-AUCC-UACU-UCC----------------UAACA------------------GAA--AGCUG-UC---C-------------------------------GCGA-----------------------------------G-GGUA-G-AG-------------------------------------------------------------------UAACGUA--GAAGAAAAUA--ACCGCC------------------------------------GC--------------------------U-----CC---------------------------------------------U---------------------------------------------------------------------------------------------------------------------------------UUCG------------------------------------------------------------------------------------------------------G---G-G---A-G-A---GGUAAG---G-GUGAGAA-GGUG-----------------------------------GGGUAAGAGCC-UACCAG---CAG---CAU-G-GU----------------------------GA-CA-UG--UGG---GCU-------------------------------------GUA-C---GUCUUAGGA---G-UUGUAAGGUCAUGU----------------------------------------AAACCGGC-GU-UA----------------------------------------------------------------------UG--AG-AGUU--------------------------------------GC-UC---------GC-U-CC--------------------------------------AU-GUCGG-----------------------------------------------------AGGGU--AG-ACCGCU------------------------------------AAA-GUG-UC-GU-G--------GUGA-------------C-AC-G-CC--A-CUC-AGAUAAAUGACAGGC-------ACCU-U---AU----------------------------------------------UAU---------------------------------------------------A------UA-A--G--G-U--ACAGAACUCGGCUUAU-AG-GCUG----ACUGCUUUU >B.burgdorferi AGCUGG-CAG--CUAGCCAUC---GCU---UAGU-U--UU---A-----------------UAAU------------------U----AA-AG-C-UAAGAGGAAAGUCCGAGCUC-C-------------AA-UAAGAAC-AUAA-UGCU-AGG----------------UAAUG------------------CCU--AGGGG-UU------------------------------------UUA-------------------------------------AACC-UAAGA------------------------------------------------------------------AAGUGUC--GCAGAAAAUU--ACCGCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUAAAA-----------------------------------------------------------------------------------------------------------------------GGUAAG---G-GUGAAAA-GGUG-----------------------------------AGGUAAGAGCU-CACC-G---CUU---AUU-UAGC----------------------------AAUAA-AUACAGG----C-------------------------------------AAGA-UAA-ACCUCAUUA---G-GAGCAAGAUCAAGU-----------------------------------------AUGAAAG-C--A------------------------------------------------------------------------C--CC-UUUG--------------------------------------UU-CUU--------GA-G-GA----------------------------------CAU--G-CUUAC------------------------------------------------------GGGU--AG-AUCGCU------------------------------------CGA-UUU-UU-UU-A--------GCGA-------------U-AA-A-AA--A-AUA-AGAGAGAUGAUGGCAUA---------------------------------------------------------------------------------------------------------------------------------------GUACAGAACUCGGCUUAU-GG-GUGU----CAGCUUAAU >T.pallidum AGAGA-ACU-GCAGAUAGUC---GCU---GCGG-G-------------------------UUU---------------------------CU-C-GCAGAGGAAAGUCCGGACUC-C--------------U--UCGGAA-AUGA-UGCU-AGU----------------UAAUU------------------ACU--AGGCA-GC---GGC-----U-CU--------------------CUGC------------------------A--GUG---C-C-GCUGAC-AGC------------------------------------------------------------------AAGCGCC--ACAGAAAAUAU-ACCGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UUUG------------------------------------------------------------------------------------------------------------------------GGUAAG---G-GUGAAAG-GGCG-----------------------------------AGGUAAGAGCU-CACC-G---CGU---UUU-G-GC----------------------------GA-CA-AA--ACG---GC-------------------------------------ACGG-CAA-GCCUCAUCA---G-GAGCAAGAUCGAG------------------------------------------CAGCAAA-----------------------------------------------------------------------------------GGAUA-------------------------------------UU-CCGA-------UC-C-------------------------------------UGU----UUUGC------------------------------------------------------GGGU--UG-AUUGCA------------------------------------UAA-AUU-UA-UA-UA-------GCGA------------UA-UA-U-AA--A-GUG-AGACAGAUGAUUAUCCU---------------------------------------------------------------------------------------------------------------------------------------UGACAGAAUCCGGCUUAC--C-AGUU----CUCU-GUUUU >C.limicola AAACCGCAAG--UGUGCAGUC---GCU---GUAU-G--GC---------------------UUGAC----------------------GC-UG-U-GCAGAGGAAAGUCCGAACUU-C------------ACA----GGGC-AGGGU-GCCGGUCGAGAAC-----------CUG-------------GUUCAAGGCC-GGGGG-CA---GCG-----G-U---------------------GCAA---------------------------ACC---GUC-UGUCAC-AGA------------------------------------------------------------------GAGUGCA--ACAGAAAGCAA-ACCGCC------------------------------------CC--------------------------G-----GC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------UCCG----------------------------------------------------------------------------------------------------------G-C---C-G-G---AGUAAG---G-GUGAAAA-GGCG-----------------------------------GUGUAAGAGAC-CACCAG---GUG---CGU-CAGC----------------------------AAUGC-CG--UAC---GCU-------------------------------------AUG-AAA-ACCUC-CCC---G-AAGCAAGGCCAAAU-----------------------------------------AUGGAAG-C-----------UUUUU--CC---------------GCAA-----------------GG------AAAGA------A---G-GGUU--------------------------------------GC-CC---------GC-C-C-----------------------------------AAC--G-UUUCC------------------------------------------------------GGGU--AG-GCCGCA------------------------------------U------------------------------------------------------C-AGAUAAAUGACUGCA-------GCUU-C---AU--C---A--------------------------------------CUCGA----------------------------------------------U-G-A------UG-A--U--U-C--ACAGAAUUCGGCUUAC-AG-CUUC----GGUUUCAGC >D.radiodurans-g GCGGGG-AAA--CUCCUGGUC---GCG---CCUGAC--CU---GCU---------------UUUUC--------------GG-C---AGG-GA-A-GGUGAGGAAAGUCCGGGCAC-C------------GCA----GGGCAAGGA-UGCC-AGC----------------UAACG------------------GCU--GGUCG-GC---GAG-----C-CGAGCGUCCGCCUG-----AGUGCCGCAAG----CAGG-CGGAAA----GC--GGC---GAA-GUCGAA-GGA------------------------------------------------------------------CAGUGCC--ACAGAAACCAG-ACCGCC------------------------------------AC--------------------------C-----CC---------------------------------------------AC------ACA--GGC------------------------------------------------------------------------------------------------------------------CCCG--------------------------------------------------------------------------G-C-------G--CG-------GG----C---GCG---G-G-U---GGUCAG---G-GUGAAAC-GGUG-----------------------------------CGGUAAGAGCG-CACCAG---GUU---CCC-GGGA----------------------------GACCG-GG--AGC--GUCU--------------------------------------GG-UCA-ACCCCAUCC---G-GUGCAAGACCCGAC----------------------------------------AGUGCGGC-GA------------------------------------------------------------------------------G-GGCG--------------------------------------GC-CC---------GC-C-C----------------------------------GUUU-GA-GCCGC-----------------------------------------------------CAGGA--UG-GUCGCU------------------------------------UGA-GGC-GUCCU-G--------GCAA-------------C-AG-G-CG--U-CCC-AGACAGAUGAUCAGG-------CUGC-C---CC--A---G-GG----------------------------------CCAACC---------------------------------------C-----UC-U-G------GG-G--C--A-G--ACAGAACCCGGCUUAC-CG-UUUC----CCCGUGCCA >T.maritima GGAGAG-GAG--CAGGCGGUC---GCG---GGGG-C--GC---A-----------------CACC------------------U----GC-GCUU-CCCGAGGAAAGUCCGGACUC-U--------------G----GAGC-GGGG-UGCC-GGG----------------UAACG------------------CCC--GGGAG-GG-----------------------------------GUGA-------------------------------------CCCU-C-GGA------------------------------------------------------------------CAGGGCC--AUAGAGAAGAAGACCGCC------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGA--------------------------------------------------------------------------------------------------------------------G---GGCAAG---G-GUGGAAC-GGUG-----------------------------------GGGUAAGAGCC-CACCAG---CGU---CGG-G-GC----------------------------AA-CC-CG--GCG---GCU-------------------------------------UGG-CAA-CCCCCACCU---G-GAGCAAGGCCAAG------------------------------------------CAGGGGG----U---------------------------------------------------------------------------UG-GGUC--------------------------------------GC-UCC--------CC-C-UA-----------------------------------UU----CCCCC------------------------------------------------------GGGU--UG-GCCGCU------------------------------------UGA-GGU-GU-GC-G--------GUAA-------------C-GC-A-CA--C-CCC-AGAUUGAUGACCGCCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAAUCCGGCUUAU--G-CUCC----UCUCCCGUG >T.maritima-g GGAGAG-GAG--CAGGCGGUC---GCG---GGGG-C--GC---A-----------------CACC------------------U----GC-GCUU-CCCGAGGAAAGUCCGGACUC-U--------------G----GAGC-GGGG-UGCC-GGG----------------UAACG------------------CCC--GGGAG-GG-----------------------------------GUGA-------------------------------------CCCU-C-GGA------------------------------------------------------------------CAGGGCC--AUAGAGAAGAAGACCGCC------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GUUGA--------------------------------------------------------------------------------------------------------------------G---GGCAAG---G-GUGGAAC-GGUG-----------------------------------GGGUAAGAGCC-CACCAG---CGU---CGG-G-GC----------------------------AA-CC-CG--GCG---GCU-------------------------------------UGG-CAA-CCCCCACCU---G-GAGCAAGGCCAAG------------------------------------------CAGGGGG----U---------------------------------------------------------------------------UG-GGUC--------------------------------------GC-UCC--------CC-C-UA-----------------------------------UU----CCCCC------------------------------------------------------GGGU--UG-GCCGCU------------------------------------UGA-GGU-GU-GC-G--------GUAA-------------C-GC-A-CA--C-CCC-AGAUUGAUGACCGCCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAAUCCGGCUUAU--G-CUCC----UCUCCCGUG >T.neapolitana GGAGAG-GGG--UAGGUGGUC---GCG---GGGA-C--GC---A-----------------CACU------------------C----GC-GUUC-CCCGAGGAAAGUCCGGACUC-U--------------G----GAGC-GGGG-UGCC-GGG----------------UAACG------------------CCC--GGGAG-GG-----------------------------------GUGA-------------------------------------CCCU-C-GGA------------------------------------------------------------------CAGGGCC--AUAGAGAAGAAGACCGCC------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAUGA--------------------------------------------------------------------------------------------------------------------G---GGCAAG---G-GUGGAAC-GGUG-----------------------------------GGGUAAGAGCC-CACCAG---CGU---CGG-G-GC----------------------------AA-CC-CG--GCG---GCU-------------------------------------UGG-CAA-CCCCCACCU---G-GAGCAAGGCCAAG------------------------------------------CAGGGGG----U---------------------------------------------------------------------------UG-GGUU--------------------------------------GC-UCC--------CC-C-UA-----------------------------------UU----CCCCC------------------------------------------------------GGGU--UG-GCCGCU------------------------------------UGA-GGU-GU-GC-G--------GUAA-------------C-GC-A-CA--C-CCC-AGAUUGAUGACCACCCA---------------------------------------------------------------------------------------------------------------------------------------CGACAGAAUCCGGCUUAU--A-CCCC----UCUCCCGUG