RNA secondary structure comparison: sequence submission

RNA secondary structure comparison: sequence submission

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Laboratoire IBISC - Informatique, Biologie Intégrative et Systèmes Complexes

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fariza.tahi@ibisc.univ-evry.fr

Other software and tools developped by the team

TFold - RNA secondary structure prediction
miRNAFold - Ab initio miRNA prediction in genomes
SSCA - Sequences Selection for the Comparative Approach
RNA-SC - RNA secondary Structure Comparison

Other tools

Pseudoviewer - Structure visualization
RNAViz - Structure visualization
VARNA - Visualization Applet for RNA
ClustalW - Sequence alignment

External and related links

IBISC laboratory
AMISBIO Team
University of Evry Val d'Essonne
Génopole
CNRS
"Pole de competitivite" System@tics

IDDN.FR.001.220007.000.S.A.2010.000.30000

Protected work, the holder of exclusive rights is the University of Evry Val d'Essonne For questions about rights and access usage contact Ms Tahi:
fariza.tahi@ibisc.univ-evry.fr

!!! The two sequences must have same size !!!
Predicted Structure:
Put here the predicted structure in positions paired or bracket format...
Reference Structure:
Put here the reference structure in positions paired or bracket format...
Sequence size Enter the sequence size if MCC needed

-Examples of reference structures
-Help