controller
Class Processus

java.lang.Object
  javax.servlet.GenericServlet
      javax.servlet.http.HttpServlet
          controller.Processus

All Implemented Interfaces:

java.io.Serializable, javax.servlet.Servlet, javax.servlet.ServletConfig

Deprecated. Do not use : see changes on others before change here and use it...

public class Processus
extends javax.servlet.http.HttpServlet

Main controler ; interaction between modele (algorithms implementation) and viewing with JSP/web pages.
A «repository» directory is needed on root of Tomcat server to record submitted alignments, see on Fichier class to give the good root where records are done.

Since:

July 2008

Author:

Gabriel Chandesris (2008)

See Also:

Algorithms, Palindrome, PalindromeListe, PalindromeListeListe, Sequence, SequenceListe, Fichier, FichierFasta, Processus_old, Fichier.dir, Serialized Form

Field Summary

private static long

serialVersionUID Deprecated. Servlet serial Number (42).

Constructor Summary

Processus()
Deprecated.

Method Summary

static java.lang.String	alignmentRecord(java.lang.String alignment) Deprecated. Use of FichierFasta
static java.lang.String	alignmentRecordTemp(java.lang.String alignment) Deprecated. Use of FichierFasta
private static java.lang.String	decoupeString(java.lang.String chaineDecoupe) Deprecated. This method to cut a String by 80 characters length substring.
void	doGet(javax.servlet.http.HttpServletRequest requete, javax.servlet.http.HttpServletResponse reponse) Deprecated. To prevent from reload pages of accession without any "normal use".
void	doPost(javax.servlet.http.HttpServletRequest requete, javax.servlet.http.HttpServletResponse reponse) Deprecated. To obtain data from POST form.
private static java.lang.String	getScriptDestination(int numInterface) Deprecated. To get the page where to go...
static org.apache.commons.fileupload.disk.DiskFileItemFactory	newDiskFileItemFactory(javax.servlet.ServletContext context, java.io.File repository) Deprecated. Use of FichierFasta

Methods inherited from class javax.servlet.http.HttpServlet

doDelete, doHead, doOptions, doPut, doTrace, getLastModified, service, service

Methods inherited from class javax.servlet.GenericServlet

destroy, getInitParameter, getInitParameterNames, getServletConfig, getServletContext, getServletInfo, getServletName, init, init, log, log

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

serialVersionUID

private static final long serialVersionUID

Deprecated.

Servlet serial Number (42).

See Also:

Constant Field Values

Constructor Detail

Processus

public Processus()

Deprecated.

Method Detail

doGet

public void doGet(javax.servlet.http.HttpServletRequest requete,
                  javax.servlet.http.HttpServletResponse reponse)

Deprecated.

To prevent from reload pages of accession without any "normal use".
Make a redirection to main page of application / servlet.

Overrides:

doGet in class javax.servlet.http.HttpServlet

See Also:

doPost(HttpServletRequest, HttpServletResponse)

doPost

public void doPost(javax.servlet.http.HttpServletRequest requete,
                   javax.servlet.http.HttpServletResponse reponse)

Deprecated.

To obtain data from POST form.

Overrides:

doPost in class javax.servlet.http.HttpServlet

Parameters:

requete - HttpServletRequest

reponse - HttpServletResponse

getScriptDestination

private static java.lang.String getScriptDestination(int numInterface)

Deprecated.

To get the page where to go...

Parameters:

numInterface - number of the page

Returns:

(String) Path to the JSP page to go...

alignmentRecord

public static java.lang.String alignmentRecord(java.lang.String alignment)

Deprecated. Use of FichierFasta

Making the recording of alignment in a file. Could be done with FichierFasta.

Parameters:

alignment - String

Returns:

date (String)

Since:

July 2008

See Also:

Fichier, FichierFasta

alignmentRecordTemp

public static java.lang.String alignmentRecordTemp(java.lang.String alignment)

Deprecated. Use of FichierFasta

Making the recording of alignment in a file. (Don't work on the server and don't know why).

Parameters:

alignment - String

Returns:

date (String)

Since:

June 2008

See Also:

FichierFasta

decoupeString

private static java.lang.String decoupeString(java.lang.String chaineDecoupe)

Deprecated.

This method to cut a String by 80 characters length substring.

Parameters:

chaineDecoupe - (String)

Returns:

(String)

See Also:

doPost(HttpServletRequest, HttpServletResponse)

newDiskFileItemFactory

public static org.apache.commons.fileupload.disk.DiskFileItemFactory newDiskFileItemFactory(javax.servlet.ServletContext context,
                                                                                            java.io.File repository)

Deprecated. Use of FichierFasta

To permit iploading of files...

Parameters:

context - (ServletContext)

repository - (File)

Returns:

(DiskFileItemFactory)

See Also:

FichierFasta