testssuite02
Class Alignedtrna

java.lang.Object
  modele.ObjectListe
      modele.SequenceListe
          testssuite02.AlignedSequences
              testssuite02.Alignedtrna

public class Alignedtrna
extends AlignedSequences

Here is 9 sequences of tRNA, original selection made by Stefan Engelen in 2006 and before for tests.
Target sequence is hainf.

Since:

August 2008

Author:

Gabriel Chandesris (2008)

See Also:

hainf

Field Summary

static Sequence	aqaeo
static Sequence	basub
static Sequence	bobur
static Sequence	ecoli
static Sequence	hainf
static Sequence	hepyl
static Sequence	mygen
static Sequence	mypne
static Sequence	synsp

Fields inherited from class testssuite02.AlignedSequences

localinstance

Constructor Summary

private

Alignedtrna()

Method Summary

static AlignedSequences

getAlignedSequences()

Methods inherited from class testssuite02.AlignedSequences

conversionFrom, conversionFrom, convertFrom, convertFrom, getAlignment

Methods inherited from class modele.SequenceListe

addSequence, clone, combinationWithoutRepetition, combinatoire, computeAverageVariabilite, equals, factorielle, getListe, getMoyenneVariabilite, getSequence, getSequence, has, isIn, length, removeSequence, removeSequence, setListe, setSequence, sortByDecreasing, sortByIncreasing

Methods inherited from class modele.ObjectListe

addObjet, equals, getListeObjects, getObject, has, removeObject, removeObject, setListe, setObject

Methods inherited from class java.lang.Object

equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

hainf

public static final Sequence hainf

ecoli

public static final Sequence ecoli

mygen

public static final Sequence mygen

mypne

public static final Sequence mypne

synsp

public static final Sequence synsp

hepyl

public static final Sequence hepyl

basub

public static final Sequence basub

bobur

public static final Sequence bobur

aqaeo

public static final Sequence aqaeo

Constructor Detail

Alignedtrna

private Alignedtrna()

Method Detail

getAlignedSequences

public static AlignedSequences getAlignedSequences()